Publications 2013

 

  1. Li D*, Qiu Z, Shao Y, Chen Y, Guan Y, Liu M, Li Y, Gao N, Wang L, Lu X, Zhao Y and Liu M*. Heritable gene targeting in the mouse and rat using a CRISPR-Cas system. Nature Biotechnology. 2013;31:681-3.(IF=32.438)
  2. Dong S, Jia C, Zhang S, Fan G, Li Y, Shan P, Sun L, Xiao W, Li L, Zheng Y, Liu J, Wei H, Hu C, Zhang W, Chin YE, Zhai Q, Li Q, Liu J, Jia F, Mo Q, Edwards DP, Huang S, Chan L, O'Malley BW, Li X, Wang C*. The REG gamma Proteasome Regulates Hepatic Lipid Metabolism through Inhibition of Autophagy. Cell Metabolism. 2013;18:380-91.(IF=14.619)
  3. Fang Y, Chen Y, Yu L, Zheng C, Qi Y, Li Z, Yang Z, Zhang Y, Shi T, Luo J, Liu M*. Inhibition of Breast Cancer Metastases by a Novel Inhibitor of TGF beta Receptor 1. Jnci-Journal of the National Cancer Institute. 2013;105:47-58.(IF=14.336)
  4. Wang X,Cai X,Hu J,Shao N,Wang F,Zhang Q,Xiao J, Cheng Y*.Glutathione-Triggered "Off-On" Release of Anticancer Drugs from Dendrimer-Encapsulated Gold Nanoparticles. Journal of the American Chemical Society.2013;135:9805-9810.(IF=10.677)
  5. Wang R, Wang Y, Liu N, Ren C, Jiang C, Zhang K, Yu S, Chen Y, Tang H, Deng Q, Fu C, Wang Y, Li R, Liu M, Pan W, Wang P*. FBW7 regulates endothelial functions by targeting KLF2 for ubiquitination and degradation. Cell Research. 2013;23:803-19.(IF=10.526)
  6. Zhang Q, Qi S, Xu M, Yu L, Tao Y, Deng Z, Wu W, Li J, Chen Z, Wong J*. Structure-function analysis reveals a novel mechanism for regulation of histone demethylase LSD2/AOF1/KDM1b. Cell Research. 2013;23:225-41.(IF=10.526)
  7. Ali A, Wang Z, Fu J, Ji L, Liu J, Li L, Wang H, Chen J, Caulin C, Myers JN, Zhang P, Xiao J, Zhang B, Li X*. Differential regulation of the REG gamma-proteasome pathway by p53/TGF-beta signalling and mutant p53 in cancer cells. Nature Communications. 2013;4.(IF=10.015)
  8. Liu X, Gao Q, Li P, Zhao Q, Zhang J, Li J, Koseki H, Wong J*. UHRF1 targets DNMT1 for DNA methylation through cooperative binding of hemi-methylated DNA and methylated H3K9. Nature Communications. 2013;4.(IF=10.015)
  9. Wang M, Liu H, Li L, Cheng Y*. Fluorinated Dendrimer Achieves Excellent Gene Transfection Efficiency at Extremely Low Nitrogen to Phosphorus Ratios. Nature Com munications, 2013, NCOMMS-13-06700B, in press.  (IF=10.015)
  10. Li L, Zhao D, Wei H, Yao L, Dang Y, Amjad A, Xu J, Liu J, Guo L, Li D, Li Z, Zuo D, Zhang Y, Liu J, Huang S, Jia C, Wang L, Wang Y, Xie Y, Luo J, Zhang B, Luo H, Donehower LA, Moses RE, Xiao J, O'Malley BW, Li X*. REG gamma deficiency promotes premature aging via the casein kinase 1 pathway. Proceedings of the National Academy of Sciences of the United States of America. 2013;110:11005-10.(IF=9.737)
  11. Tang X, Jin R, Qu G, Wang X, Li Z, Yuan Z, Zhao C, Siwko S, Shi T, Wang P, Xiao J, Liu M*, Luo J*. GPR116, an Adhesion G-Protein-Coupled Receptor, Promotes Breast Cancer Metastasis via the Gaq-p63RhoGEF-Rho GTPase Pathway. Cancer Research. 2013;73:6206-18.(IF=8.65)
  12. Li R, Wei J, Jiang C, Liu D, Deng L, Zhang K, Wang P*. Akt SUMOylation Regulates Cell Proliferation and Tumorigenesis. Cancer Research. 2013;73:5742-53.(IF=8.65)
  13. Qiu Z, Liu M, Chen Z, Shao Y, Pan H, Wei G, Yu C, Zhang L, Li X, Wang P, Fan H, Du B, Liu B, Liu M* and Li D*. High-efficiency and heritable gene targeting in mouse by transcription activator-like effector nucleases. Nucleic Acids Research. 2013;41.(IF=8.278)
  14. Xue R, Fang Z, Zhang M, Yi Z, Wen C, Shi T*. TCMID: traditional Chinese medicine integrative database for herb molecular mechanism analysis. Nucleic Acids Research. 2013;41:D1089-D95.(IF=8.278)
  15. Cong R, Sadhan Das, Julien Douet, Wong J*, Marcus Buschbeck, Fabien Mongelard and Philippe Bouvet. 2013. macroH2A1 represses rDNA transcription.Nucleic Acids Res [Epub ahead of print]  (IF=8.278)
  16. Liu J, Cheng X, Zhang Y, Li S, Cui H, Zhang L, Shi R, Zhao Z, He C, Wang C, Zhao H, Zhang C, Fisk HA, Guadagno T, Cui Y. Phosphorylation of Mps1 by BRAF(V600E) prevents Mps1 degradation and contributes to chromosome instability in melanoma. Oncogene. 2013 Feb 7;32(6):713-23.(IF=7.357)
  17. Liao P, Wang W,Shen M, Pan W,Zhang K,Wang R, Chen T,Chen Y, Chen H, Wang P*. A Positive feedback loop between EBP2 and c-Myc regulates rDNA transcription, cell proliferation, and tumorigenesis. Cell Death & Disease. 2013; accepted. (IF=6.044)
  18. Wang Y, Dong J, Li D, Lai L, Siwko S, Li Y, Liu M*. Lgr4 Regulates Mammary Gland Development and Stem Cell Activity Through the Pluripotency Transcription Factor Sox2. Stem Cells. 2013;31:1921-31.(IF=7.701)
  19. Wu W, Zhu Y, Ma Z, Sun Y, Quan Q Li P, Hu P, Shi T, Lo C, Chu I, Huang J .Proteomic Evidence for Genetic Epistasis: ClpR4 Mutation Switches Leaf Variegation to Virescence in Arabidopsis. Plant J. 2013; 76(6):943-956. (IF=6.582)
  20. Li L, Gao N, Zhao Y, Li X, Lu Y, Liu M*, Li D*. Lgr4-mediated Wnt/beta-catenin signaling in peritubular myoid cells is essential for spermatogenesis. Development. 2013;140:1751-61.(IF=6.208)
  21. Wang X, Shao N, Zhang Q, Cheng Y*. Mitochondrial Targeting Dendrimer Allows Efficient and Safe Gene Delivery, J. Mater. Chem. B.2013, in press. (Featured Article in 2014 Emerging Investigators Themed Issue) (IF=6.101)
  22. Hu P, Shen Z, Tu H, Zhang L, Shi T* Integrating multiple resources to identify specific transcriptional cooperativity with aBayesian approach. Bioinformatics, 2013 Nov 8. [Epub ahead of print] (IF=5.323)
  23. Chen G, Wang C, Shi L, Qu X, Chen J, Yang J, Shi C, Chen L, Zhou P, Ning B, Tong W, Shi T*. Incorporating the human gene annotations in different databases significantly improved transcriptomic and genetic analyses. Rna-a Publication of the Rna Society. 2013;19:479-89.(IF=5.088)
  24. Zhang Q, Wang N, Zhao L, Xu T, Cheng Y*. P olyamidoamine Dendronized Hollow Fiber Membranes in the Recovery of Heavy Metal Ions. Acs Applied Materials & Interfaces. 2013;5:1907-12. (IF=5.008)
  25. Du B, Luo W, Li R, Tan B, Han H, Lu X, Li D, Qian M, Zhang D, Zhao Y, Liu M*. Lgr4/Gpr48 Negatively Regulates TLR2/4-associated Pattern Recognition and Innate Immunity by Targeting CD14 Expression. Journal of Biological Chemistry. 2013;288:15131-41.(IF=4.651)
  26. Liu J, Wang Y, Li L, Zhou L, Wei H, Zhou Q, Liu J, Wang W, Ji L, Shan P, Wang Y, Yang Y, Jung S, Zhang P, Wang C, Long W, Zhang B, Li X*. Site-specific Acetylation of the Proteasome Activator REG gamma Directs Its Heptameric Structure and Functions. Journal of Biological Chemistry. 2013;288:16567-78.(IF=4.651)
  27. Liu S, Qian Y, Li L, Wei G, Guan Y, Pan H, Guan X, Zhang L, Lu X, Zhao Y, Liu M*, Li D*. Lgr4 Gene Deficiency Increases Susceptibility and Severity of Dextran Sodium Sulfate-induced Inflammatory Bowel Disease in Mice. Journal of Biological Chemistry. 2013;288:8794-803.(IF=4.651)
  28. Williams KA, Zhang M, Xiang S, Hu C, Wu JY Zhang S, Ryan M, Cox AD, Der CJ, Fang B, Koomen J, Haura E, Bepler G, Nicosia SV, Matthias P, Wang C, Bai W, Zhang X. Extracellular Signal-Regulated Kinase (ERK) Phosphorylates Histone Deacetylase 6 (HDAC6) at Serine 1035 to Stimulate Cell Migration. J Biol Chem. 2013 Oct 2. [Epub ahead of print].(IF=4.651)
  29. Zhou P, Wang Z, Yuan X, Zhou C, Liu L, Wan X, Zhang F, Ding X, Wang C, Xiong S, Wang Z, Yuan J, Li Q, Zhang Y. Mixed Lineage Leukemia 5 (MLL5) Protein Regulates Cell Cycle Progression and E2F1-responsive Gene Expression via Association with Host Cell Factor-1 (HCF-1). J Biol Chem. 2013 Jun 14;288(24):17532-43.(IF=4.651)
  30. Chen G, Wang C, Shi L, Tong W, Qu X, Chen J, Yang J, Shi C, Chen L, Zhou P, Lu B, Shi T*. Comprehensively identifying and characterizing the missing gene sequences in human reference genome with integrated analytic approaches. Human Genetics. 2013;132:899-911.(IF=4.633)
  31. Wang Q, Liu X, Tang N, Archambeault DR, Li J, Song H, Tang C, He B, Matzuk MM, Wang Y*. GASZ promotes germ cell derivation from embryonic stem cells. Stem Cell Research. 2013;11:845-60.(IF=4.467)
  32. Wang X, Zhang Y, Li T, Tian W, Zhang Q, Cheng Y*. Generation 9 Polyamidoamine Dendrimer Encapsulated Platinum Nanoparticle Mimics Catalase Size, Shape, and Catalytic Activity. Langmuir. 2013;29:5262-70.(IF=4.187)
  33. Fu Y, Lu D, Lin B, Sun Q, Liu K, Xu L, Zhang S, Hu C, Wang C*, Xu Z, Zhang W. Fluorescence assay for glycan expression on living cancer cells based on competitive strategy coupled with dual-functionalized nanobiocomposites. Analyst.2013 Oct 15;138(22):7016-22. (IF=3.969)
  34. Fang Z, Lu B, Liu M, Zhang M, Yi Z, Wen C, Shi T*. Evaluating the Pharmacological Mechanism of Chinese Medicine Si-Wu-Tang through Multi-Level Data Integration. Plos One. 2013;8.(IF=3.73)
  35. Chen G, Chen J, Shi C, Shi L, Tong W, Shi T*. Dissecting the Characteristics and Dynamics of Human Protein Complexes at Transcriptome Cascade Using RNA-Seq Data. Plos One. 2013;8.(IF=3.73)
  36. Wang F, Shao N, Cheng Y*. Paramagnetic NMR Investigation of Dendrimer-based Host-guest Interactions. Plos One. 2013;8.(IF=3.73)
  37. Ding H, Gao Y, Hu C, Wang Y, Wang C, Yin JM, Sun Y, Zhang CQ. HIF-1 alpha Transgenic Bone Marrow Cells Can Promote Tissue Repair in Cases of Corticosteroid-Induced Osteonecrosis of the Femoral Head in Rabbits. Plos One. 2013;8.(IF=3.73)
  38. Li D, Lei H, Li Z, Li H, Wang Y, Lai Y*. A Novel Lipopeptide from Skin Commensal Activates TLR2/CD36-p38 MAPK Signaling to Increase Antibacterial Defense against Bacterial Infection. Plos One. 2013;8.(IF=3.73)
  39. Hata TR, Afshar M, Miller J, Two AM, Kotol P, Jackson M, Alexandrescu DT, Kabigting F, Gerber M, Lai Y*, Gallo RL. Etanercept decreases the innate immune wounding response in psoriasis. Experimental Dermatology. 2013;22:599-U11.(IF=3.578)
  40. Cai X, Hu J, Xiao J, Cheng Y*. Dendrimer and cancer: a patent review (2006-present). Expert Opinion on Therapeutic Patents. 2013;23:515-29.(IF=3.525)
  41. Jia M, Liu Y, Shen Z, Zhao C, Zhang M, Yi Z, Wen C, Deng Y, Shi T*. HDAM: a resource of human disease associated mutations from next generation sequencing studies. Bmc Medical Genomics. 2013;6.(IF=3.466)
  42. Zhao C, Mao J, Ai J, Shenwu M, Shi T, Zhang D, Wang X, Wang Y, Deng Y. Integrated lipidomics and transcriptomic analysis of peripheral blood reveals significantly enriched pathways in type 2 diabetes mellitus. Bmc Medical Genomics. 2013;6.(IF=3.466)
  43. Liu Y, Li Z, Zhang M, Deng Y, Yi Z, Shi T*. Exploring the Pathogenetic Association between Schizophrenia and Type 2 Diabetes Mellitus Diseases based on Pathway Analysis. BMC Medical Genomics, 6(Suppl 1):S17, 2013(IF=3.466)
  44. Zang Y, Xiong J, Zhai W, Cao L, Zhang S, Tang Y, Wang J, Su J, Yang G, Zhao Y, Fan H, Xia G, Wang C*, Hu JF. Fomentarols A–D, sterols from the polypore macrofungus Fomes fomentarius. Phytochemistry. 2013 Aug;92:137-45.(IF=3.05)
  45. Wu M, Wang L, Li Q, Li J, Qin J, Wong J*. The MTA family proteins as novel histone H3 binding proteins (vol 3, 1, 2013). Cell and Bioscience. 2013;3.(IF=3)
  46. Liu M,Jia M,Pan H,Ren H*,Zhang S, Xu J. Instrument Response Standard in Time-Resolved Fluorescence Spectroscopy at Visible Wavelength: Quenched Fluorescein Sodium. Applied Spectroscopy. 2013. (13-07236R) (IF=2.4)
  47. Sun M, Ding T, Tang Y, Liu M, Wang X*. Cucurbitacin E exhibits inhibitory effects on CYP2C, 3A activities in rat and human liver in vitro. Acta Pharmacologica Sinica. 2013;34:29-.(IF=2.354)
  48. Wang X*, Sun M, Tang Y, Ding T, Liu M*. Effects of celastrol, derived from Trypterygium wilfordii Hook F, on metabolism of model CYP1A2, 2C11, 2E1 and 3A2 probe substrates in rat liver in vitro. Acta Pharmacologica Sinica. 2013;34:143-4.(IF=2.354)
  49. Sun M, Tang Y, Ding T, Liu M, Wang X*. Inhibitory effects of celastrol on rat liver cytochrome P450 1A2, 2C11, 2D6, 2E1 and 3A2 activity. Fitoterapia 2014, 92, 1-8.(IF=2.231)
  50. Chen G, Shi T*. Next-generation sequencing technologies for personalized medicine: promising but challenging. Science China-Life Sciences. 2013;56:101-3.(IF=2.024)
  51. Lu B, Zeng Z, Shi T*. Comparative study of de novo assembly and genome-guided assembly strategies for transcriptome reconstruction based on RNA-Seq. Science China-Life Sciences. 2013;56:143-55.(IF=2.024)
  52. Zhang B, Liu X, Chen W, Chen L. IFIT5 potentiates anti-viral response through enhancing innate immune signaling pathways. Acta Biochimica Et Biophysica Sinica. 2013;45:867-74.(IF=1.807)
  53. Du J, Wu X, Long F, Wen J, Hao W, Chen R, Kong X, Qian M*, Jiang W*. Improvement in Efficacy of DNA Vaccine Encoding HIV-1 Vif by LIGHT Gene Adjuvant. Viral Immunology. 2013;26:68-74.(IF=1.75)
  54. Fang Z, Zhang M, Yi Z, Wen C, Qian M*, Shi T*. Replacements of Rare Herbs and Simplifications of Traditional Chinese Medicine Formulae Based on Attribute Similarities and Pathway Enrichment Analysis. Evidence-Based Complementary and Alternative Medicine. 2013.(IF=1.722)
  55. Siwko S, Lai L, Weng J, Liu M*. Lgr4 in Ocular Development and Glaucoma. Journal of Ophthalmology. 2013.(IF=1.368)
  56. Tu HB, Shi T*. Ligand Binding Site Similarity Identification Based on Chemical and Geometric Similarity. Protein Journal. 2013;32:373-85.(IF=1.126)
  57. Zhang BH, Liu J, Zhou QX, Zuo D, Wang Y*. Analysis of differentially expressed genes in ductal carcinoma with DNA microarray. European Review for Medical and Pharmacological Sciences. 2013;17:758-66.(IF=1.091)
  58. Li P, Gao S, Wang L, Yu F, Li J, Wang C, Li J, Wong J*. ABH2 Couples Regulation of Ribosomal DNA Transcription with DNA Alkylation Repair. Cell Reports. 2013;4:817-29.
  59. Hata TR, Afshar M, Miller J, Two AM, Kotol P, Jackson M, Alexandrescu DT, Kabigting F, Gerber M, Lai Y, Gallo RL. Etanercept decreases the innate immune wounding response in psoriasis. Exp Dermatol. 2013, 22(9): 599-601.
  60. Li C, Li H, Jiang Z, Zhang T, Wang Y, Li Z, Wu Y, Ji S, Xiao S, Ryffel B, Radek K, Xia Z, Lai Y*. Interleukin-33 Increases Antibacterial Defense by Activation of Inducible Nitric Oxide Synthase in Skin. PLoS Pathogens. Accepted.


2017-10-30

上海市调控生物学重点实验室    上海市东川路500号华东师范大学生命科学学院生命医学研究所    邮编 200241   联系人:韩姬    沪ICP备05003394

Email:jhan@bio.ecnu.edu.cn    电话:021-54344030    技术支持:ECNU信息化办公室